Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844112.1_cds_XP_016508923.1_21896
CDS Infomation

[gene=LOC107826455] [db_xref=GeneID:107826455] [protein=twinkle homolog protein, chloroplastic/mitochondrial] [protein_id=XP_016508923.1] [location=join(6676..6919,7459..7601,9469..9524,9616..9673,9763..9876,11540..11623,12960..13040,14376..14441,14532..14648,15125..15172,15264..15349,15813..15873,16602..16784,18073..18204,19954..20015,24877..24960,28026..28157,41265..41361,41453..41587,41667..41734,42124..42172)] [gbkey=CDS]
Sequence

ATGATTCTTCTACCTTATCGCAGACTTGTACTAAACAACTCTAACAATTTTGCCATGGGC
TCCAAATATTTTCTCCACAAGCCATCCATTACCATACACAAGACTATTATTCCTGTCCTT
TCTTCAAAAACCCACCTTTTTCAAAACCAAAGACTCATCTTTTCAACATTTGCTTCAAAA
CCCATCTCCCCAATTCGTGGAACTTCAAACTTGTCTTACAGGCCCCACCGTATTCCTCCA
CCAGTTTCTGGAGTAGTTCTGGAAGACCCAGTGGAGGGAATTGCGGAGTCAGAACATGTG
AAGGCACTGAAGGAGAAATTAAGCCAGGTTGGAATAGATATTGGTTCTTGTGGACCAGGG
CAATACTCTGGTTTGCTTTGTCCAATGTGCACAGGTGGGGATTCAAATGAAAAGAGCTTA
TCTCTCTTCATTACTCAGGATGGGCATGCAGCTACATGGACATGCTTTCGAGCTAAATGT
GGGTGGAGAGGTGGTACCCGGGCCTTTGCAGATGTGAAGACAGCTTTTGCAGATATGAAA
AGGATTGGAAAAGTGACTAAGAAGTACAGACAGATAACTGAGGAGAGTTTGGGGCTGGAA
CCTTTATGTGATGTGTTACTCTCATACTTTTCTGAGCGAATGATATCGAGAGAAACATTG
CGGAGAAATGCGGTTATGCAACGGAGATATGGTGATCAGATTGTTATTGCATTTACATAT
CGGAGGGATGGAGCACTTGTAAGCTGCAAGTACCGGGACATCACCAAAAAGTTTTGGCAG
GAAGCTGATACATTAAAGATATTTTATGGTCTAGACGATATAAAAGGAGCAAGTGATATC
ATCATTGTTGAGGGTGAGATGGACAAGCTTGCTATGGAAGAAGCTGGCTTTCGGAACTGT
GTGAGCGTTCCCGATGGGGCACCTCCAGTTGTTTCAGATAAAGAGTTGCCACCTGTAGAT
AAGGACACAAAGTATCAGTATCTTTGGAACTGCAAAGAGTATTTAGAAAAGGCATCTCGC
ATAATACTGGCAACTGATGGGGATCCACCTGGTCAAGCTTTAGCTGAAGAACTTGCCCGC
CGCTTGGGGCGAGAAAGGTGCTGGCGAGTCACATGGCCGAAAAAGAGCACTAAAGACCGT
TTCAAAGATGCAAATGAGGTACTTATGTATCTGGGGCCTGGTGCACTGAGGGAGGTTATT
GAAGGTGCAGAGCTATACCCAATACAAGGGTTATTCAACTTTAAAGATTACTTCACTGAG
ATTGATGCATATTATCACCAAACAATTGGCTATGAGCTTGGGGTTTCAACTGGATGGAGA
TCTTTAAATCAACTATACAATGTTGTGCCTGGAGAGTTGACTATTGTTACAGGAGTCCCA
AATTCGGGGAAGAGTGAATGGATTGATGCTCTTTTGTGCAATCTCAATCAGAGTGTTGGC
TGGAAATTTGCACTTTGCTCTATGGAAAATAAGGTGCGGGACCATGCTAGGAAACTTTTG
GAGAAACACATAAAGAAACCATTCTTTGATGTGAGATATGGGGAATCTGTTCAACGGATG
AGTGCTCAAGAGTTTGAAGAGGGAAAGCAATGGCTCAGTGATACTTTTTTCCTCATAAGG
TGTGAGAATGATTGCCTACCGAATATTGACTGGGTTCTGTCACTTGCAAAAGCTGCAGTT
TTAAGACATGGGGTGAATGGACTCGTAATTGATCCATACAATGAGCTTGATCATCAACGT
CCTTCAAGCCAGACTGAAACAGAGTATGTCAGCCAGATGCTGACAAAGATCAAACGGTTT
GCGCAACACCATTCCTGTCATGTTTGGTTTGTTGCACATCCGAGACAGTTGCATCATTGG
GTAGGAGGTCCTCCAAATCTGTACGATATTAGCGGAAGTGCACACTTCATAAACAAATGT
GACAATGGTATTGTTATTCACCGTAACAGAGACCCTTCGGCTGGCCCTGTGGATCAAGTG
CAGGTCTGTGTAAGAAAGGTGCGGAATAAAGTTAGTGGAACAATTGGTGATGCCTTCTTG
TCATATGACAGGGTTACTGGTGAATTCATGGACCTTGACGAGCACCCAAGCAAAGGCTAG

Peptide Sequence

PEP ID

XP_016508923.1
PEP Infomation

PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nicotiana tabacum]
Sequence

MILLPYRRLVLNNSNNFAMGSKYFLHKPSITIHKTIIPVLSSKTHLFQNQRLIFSTFASK
PISPIRGTSNLSYRPHRIPPPVSGVVLEDPVEGIAESEHVKALKEKLSQVGIDIGSCGPG
QYSGLLCPMCTGGDSNEKSLSLFITQDGHAATWTCFRAKCGWRGGTRAFADVKTAFADMK
RIGKVTKKYRQITEESLGLEPLCDVLLSYFSERMISRETLRRNAVMQRRYGDQIVIAFTY
RRDGALVSCKYRDITKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNC
VSVPDGAPPVVSDKELPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQALAEELAR
RLGRERCWRVTWPKKSTKDRFKDANEVLMYLGPGALREVIEGAELYPIQGLFNFKDYFTE
IDAYYHQTIGYELGVSTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNQSVG
WKFALCSMENKVRDHARKLLEKHIKKPFFDVRYGESVQRMSAQEFEEGKQWLSDTFFLIR
CENDCLPNIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRF
AQHHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQV
QVCVRKVRNKVSGTIGDAFLSYDRVTGEFMDLDEHPSKG

Transcript Sequence

Gene sequence data has not been registered.